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Institut Sophia Agrobiotech

Institut Sophia Agrobiotech

Institut Sophia Agrobiotech

UMR INRA - Univ. Nice Sophia Antipolis - Cnrs
Inra PACA
400 route des chappes
BP 167
0690 Sophia Antipolis Cedex
FRANCE
Tel. : +33(0)4 92 38 64 00
Fax : + 33(0)4 92 38 64 01

http://www.paca.inra.fr/institut-sophia-agrobiotech

Publications

2017

  • Blanc-Mathieu, R., Perfus-Barbeoch, L., Aury, J.-M., Rocha, M.D., Gouzy, J., Sallet, E., Martin-Jimenez, C., Bailly-Bechet, M., Castagnone-Sereno, P., Flot, J.-F., et al. (2017). Hybridization and polyploidy enable genomic plasticity without sex in the most devastating plant-parasitic nematodes. PLOS Genetics 13, e1006777. DOI: 10.1371/journal.pgen.1006777
  • Guimaraes, L.A., Mota, A.P.Z., Araujo, A.C.G., Figueiredo, L.F. de A., Pereira, B.M., Saraiva, M.A. de P., Silva, R.B., Danchin, E.G.J., Guimaraes, P.M., and Brasileiro, A.C.M. (2017). Genome-wide analysis of expansin superfamily in wild Arachis discloses a stress-responsive expansin-like B gene. Plant Mol Biol 1–18. DOI: 10.1007/s11103-017-0594-8
  • Medina, I.L., Gomes, C.B., Correa, V.R., Mattos, V.S., Castagnone-Sereno, P., and Carneiro, R.M.D.G. (2017). Genetic diversity of Meloidogyne spp. parasitising potato in Brazil and aggressiveness of M. javanica populations on susceptible cultivars. Nematology 19, 69–80. DOI: 10.1163/15685411-00003032
  • Petitot, A.-S., Kyndt, T., Haidar, R., Dereeper, A., Collin, M., de Almeida Engler, J., Gheysen, G., and Fernandez, D. Transcriptomic and histological responses of African rice (Oryza glaberrima) to Meloidogyne graminicola provide new insights into root-knot nematode resistance in monocots. Ann Bot. DOI: 10.1093/aob/mcw256
  • Ramos Coelho, R., Vieira, P., Antonino de Souza Júnior, J.D., Martin-Jimenez, C., De Veylder, L., Cazareth, J., Engler, G., Grossi-de-Sa, M.F., and de Almeida Engler, J. (2017). Exploiting cell cycle inhibitor genes of the KRP family to control root-knot nematode induced feeding sites in plants. Plant, Cell & Environment. Doi: 10.1111/pce.12912

2016

  • Baldacci-Cresp, F., Sacré, P.-Y., Twyffels, L., Mol, A., Vermeersch, M., Ziemons, E., Hubert, P., Pérez-Morga, D., El Jaziri, M., Engler, J. de A., et al. (2016). Poplar–Root Knot Nematode Interaction: A Model for Perennial Woody Species. MPMI 29, 560–572.
  • Blanc-Mathieu, R., Perfus-Babeoch, L., Aury, J.-M., Rocha, M.D., Gouzy, J., Sallet, E., Martin-Jimenez, C., Castagnone-Sereno, P., Flot, J.-F., Kozlowski, D., et al. (2016). Peculiar hybrid genomes of devastating plant pests promote plasticity in the absence of sex and meiosis. bioRxiv 046805. DOI: 10.1101/046805
  • Damiani I., Drain A., Guichard M., Balzergue S., Boscari A., Boyer J-C, Brunaud V., Cottaz S., Rancurel C., Da Rocha M., Fizames C., Fort S., Gaillard I., Danchin E.G.J., Maillol V., Rouached H., Samain E., Su Y-H, Thouin J., Touraine B., Puppo A., Frachisse J-M, Pauly N., Sentenac H. (2016). Nod factor effects on root hair-specific transcriptome of Medicago truncatula: focus on plasma membrane transport systems and reactive oxygen species networks. Front. Plant Sci. 7, 794. DOI: 10.3389/fpls.2016.00794
  • Danchin, E.G.J., Guzeeva, E.A., Mantelin, S., Berepiki, A., and Jones, J.T. (2016). Horizontal gene transfer from bacteria has enabled the plant-parasitic nematode Globodera pallida to feed on host-derived sucrose. Mol Biol Evol msw041. DOI: 10.1093/molbev/msw041
  • Díaz-Manzano, F.E., Barcala, M., Engler, G., Fenoll, C., de Almeida-Engler, J., and Escobar, C. (2016). A Reliable Protocol for In situ microRNAs Detection in Feeding Sites Induced by Root-Knot Nematodes. Front Plant Sci 7, 966. DOI: 10.3389/fpls.2016.00966
  • Eves-van den Akker, S., Laetsch, D.R., Thorpe, P., Lilley, C.J., Danchin, E.G.J., Da Rocha, M., Rancurel, C., Holroyd, N.E., Cotton, J.A., Szitenberg, A., et al. (2016). The genome of the yellow potato cyst nematode, Globodera rostochiensis, reveals insights into the basis of parasitism and virulence. Genome Biology 17, 124. Doi: 10.1186/s13059-016-0985-1
  • Fatouros, N.E., Cusumano, A., Danchin, E.G.J., and Colazza, S. (2016). Prospects of herbivore egg-killing plant defenses for sustainable crop protection. Ecol Evol 6, 6906–6918.
  • Fernandez, D., Petitot, A.-S., Grossi de Sá, M., Nguyễn, V.P., de Almeida Engler, J., and Kyndt, T. (2015). Chapter Eight - Recent Advances in Understanding Plant–Nematode Interactions in Monocots. In Advances in Botanical Research, C.E. and C. Fenoll, ed. (Academic Press), pp. 189–219.
  • Hanemian, M., Barlet, X., Sorin, C., Yadeta, K.A., Keller, H., Favery, B., Simon, R., Thomma, B.P.H.J., Hartmann, C., Crespi, M., et al. (2016). Arabidopsis CLAVATA1 and CLAVATA2 receptors contribute to Ralstonia solanacearum pathogenicity through a miR169-dependent pathway. New Phytol. DOI: 10.1111/nph.13913
  • Keller, H., Boyer, L., and Abad, P. (2016). Disease susceptibiliy in the zig-zag model of host-microbe Interactions: Only a consequence of immune suppression? Molecular Plant Pathology. DOI: 10.1111/mpp.12371
  • Kyndt, T., Goverse, A., Haegeman, A., Warmerdam, S., Wanjau, C., Jahani, M., Engler, G., Engler, J. de A., and Gheysen, G. (2016). Redirection of auxin flow in Arabidopsis thaliana roots after infection by root-knot nematodes. J. Exp. Bot. erw230. DOI: 10.1093/jxb/erw230
  • Quentin, M., Baurès, I., Hoefle, C., Caillaud, M.-C., Allasia, V., Panabières, F., Abad, P., Hückelhoven, R., Keller, H., and Favery, B. (2016). The Arabidopsis microtubule-associated protein MAP65-3 supports infection by filamentous biotrophic pathogens by down-regulating salicylic acid-dependent defenses. J. Exp. Bot. erv564. DOI: 10.1093/jxb/erv564
  • Saucet, S.B., Van Ghelder, C., Abad, P., Duval, H., and Esmenjaud, D. (2016). Resistance to root-knot nematodes Meloidogyne spp. in woody plants. New Phytol. DOI: 10.1111/nph.13933
  • Shelomi, M., Danchin, E.G.J., Heckel, D., Wipfler, B., Bradler, S., Zhou, X., and Pauchet, Y. (2016). Horizontal Gene Transfer of Pectinases from Bacteria Preceded the Diversification of Stick and Leaf Insects. Scientific Reports 6, 26388. DOI: 10.1038/srep26388
  • Truong, N.M., Nguyen, C.-N., Abad, P., Quentin, M., and Favery, B. (2015). Chapter Twelve - Function of Root-Knot Nematode Effectors and Their Targets in Plant Parasitism. In Advances in Botanical Research, C.E. and C. Fenoll, ed. (Academic Press), pp. 293–324.
  • Van Ghelder, C., and Esmenjaud, D. (2016). TNL genes in peach: insights into the post-LRR domain. BMC Genomics 17, 317. DOI: 10.1186/s12864-016-2635-0

2015

  • Albuquerque, É.V.S., Bezerra, C.A., Romero, J.V., Valencia, J.W.A., Valencia-Jiménez, A., Pimenta, L.M., Barbosa, A.E.A.D., Silva, M.C.M., Meneguim, A.M., Sá, M.E.L., et al. (2015). Seed-Specific Stable Expression of the α-AI1 Inhibitor in Coffee Grains and the In Vivo Implications for the Development of the Coffee Berry Borer. Tropical Plant Biol. 1–10. DOI: 10.1007/s12042-015-9153-0
  • Baldacci-Cresp, F., MickaëlMaucourt, Deborde, C., Pierre, O., AnnickMoing, Brouquisse, R., Favery, B., and Frendo, P. Maturation of nematode-induced galls in Medicago truncatula is related to water status and primary metabolism modifications. Plant Science. DOI: 10.1016/j.plantsci.2014.12.01
  • Barbary, A., Djian-Caporalino, C., Palloix, A., and Castagnone-Sereno, P. (2015). Host genetic resistance to root-knot nematodes, Meloidogyne spp., in Solanaceae: from genes to the field. Pest. Manag. Sci. DOI: 10.1002/ps.4091
  • Cabrera, J., Barcala, M., García, A., Rio-Machín, A., Medina, C., Jaubert-Possamai, S., Favery, B., Maizel, A., Ruiz-Ferrer, V., Fenoll, C., et al. (2015). Differentially expressed small RNAs in Arabidopsis galls formed by Meloidogyne javanica: a functional role for miR390 and its TAS3-derived tasiRNAs. New Phytol. DOI: 10.1111/nph.13735
  • Cabrera, J., Díaz-Manzano, F.E., Barcala, M., Arganda-Carreras, I., de Almeida-Engler, J., Engler, G., Fenoll, C., and Escobar, C. (2015). Phenotyping nematode feeding sites: three-dimensional reconstruction and volumetric measurements of giant cells induced by root-knot nematodes in Arabidopsis. New Phytol. DOI: 10.1111/nph.13249
  • Castagnone-Sereno, P., Mulet, K., and Iachia, C. (2015). Tracking changes in life-history traits related to unnecessary virulence in a plant-parasitic nematode. Ecol Evol. DOI: 10.1002/ece3.1643
  • Engler, J. de A., Vieira, P., Rodiuc, N., Sa, M.F.G. de, and Engler, G. (2015). The plant cell cycle machinery: usurped and modulated by plant-parasitic nematodes. Advances in Botanical Research 73, 91–118.
  • Favery, B., Quentin, M., Jaubert-Possamai, S., and Abad, P. Gall-forming root-knot nematodes hijack key plant cellular functions to induce multinucleate and hypertrophied feeding cells. Journal of Insect Physiology. DOI: 10.1016/j.jinsphys.2015.07.013
  • Gauffre, B., Mallez, S., Chapuis, M.-P., Leblois, R., Litrico, I., Delaunay, S., and Badenhausser, I. (2015). Spatial heterogeneity in landscape structure influences dispersal and genetic structure: empirical evidence from a grasshopper in an agricultural landscape. Molecular Ecology24, 1713–1728. DOI: 10.1111/mec.13152
  • Ciordia, S., Robertson, L., Arcos, S.C., González, M.R., Mena, M. del C., Zamora, P., Vieira, P., Abrantes, I., Mota, M., Castagnone-Sereno, P., et al. (2015). Protein markers of Bursaphelenchus xylophilus Steiner & Buhrer, 1934 (Nickle, 1970) populations using quantitative proteomics and character compatibility. Proteomics. DOI: 10.1002/pmic.201500106
  • Lourenço-Tessutti, I.T., Souza Junior, J.D.A., Martins-de-Sa, D., Viana, A.A.B., Carneiro, R.M.D.G., Togawa, R.C., de Almeida-Engler, J., Batista, J.A.N., Silva, M.C.M., Fragoso, R.R., et al. (2015). Knock-Down of Heat-Shock Protein 90 and Isocitrate Lyase Gene Expression Reduced Root-Knot Nematode Reproduction. Phytopathology 105, 628–637. DOI: 10.1094/PHYTO-09-14-0237-R
  • Mallez, S., Castagnone, C., Espada, M., Vieira, P., Eisenback, J.D., Harrell, M., Mota, M., Aikawa, T., Akiba, M., Kosaka, H., et al. (2014). Worldwide invasion routes of the pinewood nematode: What can we infer from population genetics analyses? Biol Invasions 17, 1199–1213. DOI: 10.1007/s10530-014-0788-9
  • Paganelli, L., Caillaud, M.-C., Quentin, M., Damiani, I., Govetto, B., Lecomte, P., Karpov, P.A., Abad, P., Chabouté, M.-E., and Favery, B. (2014). Three BUB1 and BUBR1/MAD3-related spindle assembly checkpoint proteins are required for accurate mitosis in Arabidopsis. New Phytologist 205, 202–215. DOI: 10.1007/s00265-006-0198-9
  • Rodiuc, N., Barlet, X., Hok, S., Perfus-Barbeoch, L., Allasia, V., Engler, G., Séassau, A., Marteu, N., de Almeida-Engler, J., Panabières, F., et al. (2015). Evolutionarily distant pathogens require the Arabidopsis phytosulfokine signalling pathway to establish disease. Plant Cell Environ. DOI: 10.1111/pce.12627
  • Truong, N.M., Nguyen, C.-N., Abad, P., Quentin, M., and Favery, B. (2015). Chapter Twelve - Function of Root-Knot Nematode Effectors and Their Targets in Plant Parasitism. In Advances in Botanical Research, C.E. and C. Fenoll, ed. (Academic Press), pp. 293–324.
  • Van Ghelder, C., Reid, A., Kenyon, D., and Esmenjaud, D. (2015). Detection of nepovirus vector and nonvector xiphinema species in grapevine. Methods Mol. Biol. 1302, 149–159. DOI: 10.1007/978-1-4939-2620-6_12
  • Van Ghelder, C., Reid, A., Kenyon, D., and Esmenjaud, D. (2015). Development of a real-time PCR method for the detection of the dagger nematodes Xiphinema index, X. diversicaudatum, X. vuittenezi and X. italiae, and for the quantification of X. index numbers. Plant Pathol 64, 489–500. DOI: 10.1111/ppa.12269
  • Vieira, P., and Engler, J. de A. (2015). The plant cell inhibitor KRP6 is involved in multinucleation and cytokinesis disruption in giant-feeding cells induced by root-knot nematodes. Plant Signaling & Behavior 10. DOI: 10.1080/15592324.2015.1010924

2014

  • Bernstein, A., Mangeon, A., Almeida-Engler, J., Engler, G., Montagu, M.V., Sachetto-Martins, G., and de Oliveira, D.E. (2014). Functional analysis of an auxin-inducible DNA-binding protein gene. Plant Signal Behav. DOI: 10.4161/15592324.2014.977706
  • Bird, D.M., Jones, J.T., Opperman, C.H., Kikuchi, T., and Danchin, E.G.J. (2014). Signatures of adaptation to plant parasitism in nematode genomes. Parasitology FirstView, 1–14.
     DOI:10.1017/S0031182013002163
  • Carneiro, R.M.D.G., Correa, V.R., Almeida, M.R.A., Gomes, A.C.M.M., Deimi, A.M., Castagnone-Sereno, P., and Karssen, G. (2014). Meloidogyne luci n. sp. (Nematoda: Meloidogynidae), a root-knot nematode parasitising different crops in Brazil, Chile and Iran. Nematology 16, 289–301. DOI: 10.1163/15685411-00002765
  • Castagnone-Sereno, P., and Danchin, E.G.J. (2014). Parasitic success without sex – the nematode experience. Journal of Evolutionary Biology. DOI: 10.1111/jeb.12337.
  • Correa, V.R., Mattos, V.S., Almeida, M.R.A., Santos, M.F.A., Tigano, M.S., Castagnone-Sereno, P., and Carneiro, R.M.D.G. (2014). Genetic diversity of the root-knot nematode Meloidogyne ethiopica and development of a species-specific SCAR marker for its diagnosis. Plant Pathol 63, 476–483. DOI: 10.1111/ppa.12108
  • Djian-Caporalino, C., Palloix, A., Fazari, A., Marteu, N., Barbary, A., Abad, P., Sage-Palloix, A.-M., Mateille, T., Risso, S., Lanza, R., et al. (2014). Pyramiding, alternating or mixing: comparative performances of deployment strategies of nematode resistance genes to promote plant resistance efficiency and durability. BMC Plant Biology 14, 53. DOI: 10.1186/1471-2229-14-53.
  • Eves-van den Akker S., Lilley, C.J., Danchin, E.G.J., Rancurel, C., Cock, P.J.A., Urwin, P.E., and Jones, J.T. (2014). The transcriptome of Nacobbus aberrans reveals insights into the evolution of sedentary endoparasitism in plant-parasitic nematodes. Genome Biol Evol. DOI: 10.1093/gbe/evu171
  • Mouttet, R., Escobar-Gutiérrez, A., Esquibet, M., Gentzbittel, L., Mugniéry, D., Reignault, P., Sarniguet, C., and Castagnone-Sereno, P. (2014). Banning of methyl bromide for seed treatment: could Ditylenchus dipsaci again become a major threat to alfalfa production in Europe? Pest Manag. Sci. 70, 1017–1022. DOI: 10.1002/ps.3745
  • Nguyễn, P.V., Bellafiore, S., Petitot, A.-S., Haidar, R., Bak, A., Abed, A., Gantet, P., Mezzalira, I., Engler, J. de A., and Fernandez, D. (2014). Meloidogyne incognita - rice (Oryza sativa) interaction: a new model system to study plant–root-knot nematode interactions in monocotyledons. Rice 7, 1–13. DOI: 10.1186/s12284-014-0023-4.
  • Perfus-Barbeoch, L., Castagnone-Sereno, P., Reichelt, M., Fneich, S., Roquis, D., Pratx, L., Cosseau, C., Grunau, C., and Abad, P. (2014). Elucidating the molecular bases of epigenetic inheritance in non-model invertebrates: the case of the root-knot nematode Meloidogyne incognita. Frontiers in Physiology. 2014;5:211. Doi: 10.3389/fphys.2014.00211
  • Rodiuc, N., Vieira, P., Banora, M.Y., and de Almeida Engler, J. (2014). On the track of transfer cell formation by specialized plant-parasitic nematodes. Front Plant Sci 5, 160. DOI: 10.3389/fpls.2014.00160
  • Sapountzis, P., Duport, G., Balmand, S., Gaget, K., Jaubert-Possamai, S., Febvay, G., Charles, H., Rahbé, Y., Colella, S., and Calevro, F. New insight into the RNA interference response against cathepsin-L gene in the pea aphid, Acyrthosiphon pisum: molting or gut phenotypes specifically induced by injection or feeding treatments. Insect Biochemistry and Molecular Biology. DOI: 10.1016/j.ibmb.2014.05.005
  • Silva, E.H. da, Mattos, V. da S., Furlaneto, C., Giband, M., Barroso, P.A.V., Moita, A.W., Jorge-Junior, A., Correa, V.R., Castagnone-Sereno, P., and Carneiro, R.M.D.G. (2014). Genetic variability and virulence of Meloidogyne incognita populations from Brazil to resistant cotton genotypes. Eur J Plant Pathol 139, 195–204. DOI: 10.1007/s10658-014-0381-1
  • Veneault-Fourrey, C., Commun, C., Kohler, A., Morin, E., Balestrini, R., Plett, J., Danchin, E., Coutinho, P., Wiebenga, A., de Vries, R.P., et al. (2014). Genomic and transcriptomic analysis of Laccaria bicolor CAZome reveals insights into polysaccharides remodelling during symbiosis establishment. Fungal Genet. Biol. DOI:10.1016/j.fgb.2014.08.007
  • Vieira, P., Castagnone, C., Mallez, S., Espada, M., Navas, A., Mota, M., and Castagnone-Sereno, P. (2014). Sequence variability of the MspI satellite DNA family of the pinewood nematode Bursaphelenchus xylophilus at different geographic scales. Molecular Phylogenetics and Evolution 70, 120–129.
  • Vieira, P., Clercq, A.D., Stals, H., Leene, J.V., Slijke, E.V.D., Isterdael, G.V., Eeckhout, D., Persiau, G., Damme, D.V., Verkest, A., et al. (2014). The Cyclin-Dependent Kinase Inhibitor KRP6 Induces Mitosis and Impairs Cytokinesis in Giant Cells Induced by Plant-Parasitic Nematodes in Arabidopsis. Plant Cell tpc.114.126425. DOI: 10.1105/tpc.114.126425.
  • Wieczorek, K., El Ashry, A.E.N., Quentin, M., Grundler, F.M.W., Favery, B., Seifert, G.J., and Bohlmann, H. (2014). A distinct role of pectate lyases in the formation of feeding structures induced by cyst and root-knot nematodes. Mol. Plant Microbe Interact. DOI: 10.1094/MPMI-01-14-0005-R

2013

  • Antonino de Souza Junior, J.D., Ramos Coelho, R., Tristan Lourenco, I., da Rocha Fragoso, R., Barbosa Viana, A.A., Lima Pepino de Macedo, L., Mattar da Silva, M.C., Gomes Carneiro, R.M., Engler, G., de Almeida-Engler, J., et al. (2013). Knocking-Down Meloidogyne incognita Proteases by Plant-Delivered dsRNA Has Negative Pleiotropic Effect on Nematode Vigor. PLoS One. 2013; 8(12): e85364.Published online 2013 December 31. doi:  10.1371/journal.pone.0085364
  • Barbary, A., Palloix, A., Fazari, A., Marteu, N., Castagnone-Sereno, P., and Djian-Caporalino, C. The plant genetic background affects the efficiency of the pepper major nematode resistance genes Me1 and Me3. Theor Appl Genet 1–9. DOI:10.1007/s00122-013-2235-1
  • Bermond, G., Blin, A., Vercken, E., Ravigné, V., Rieux, A., Mallez, S., Morel-Journel, T., and Guillemaud, T. (2013). Estimation of the dispersal of a major pest of maize by cline analysis of a temporary contact zone between two invasive outbreaks. Mol Ecol. DOI: 10.1111/mec.12489.
  • Castagnone-Sereno P., Danchin E.G.J., Perfus-Barbeoch L. and Abad P. (2013). Diversity and evolution of root-knot nematodes, genusMeloidogyne: new insights from the genomic era. Annual Review of Phytopathology 51 : in press (doi: 10.1146/annurev-phyto-082712-102300).
  • Castro-Quezada, P., Aarrouf, J., Claverie, M., Favery, B., Mugniéry, D., Lefebvre, V., and Caromel, B. (2013). Identification of Reference Genes for Normalizing RNA Expression in Potato Roots Infected with Cyst Nematodes. Plant Mol Biol Rep 31, 936–945.
  • Correa, V.R., Santos, M.F.A. dos, Almeida, M.R.A., Peixoto, J.R., Castagnone-Sereno, P., and Carneiro, R.M.D.G. (2013). Species-specific DNA markers for identification of two root-knot nematodes of coffee: Meloidogyne arabicida and M. izalcoensis. Eur J Plant Pathol 137, 305–313. DOI: 10.1007/s10658-013-0242-3
  • Dalzell, J.J., McVeigh, P., Warnock, N.D., Mitreva, M., Bird, D.M., Abad, P., Fleming, C.C., Day, T.A., Mousley, A., Marks, N.J., et al. (2011). RNAi Effector Diversity in Nematodes. PLoS Negl Trop Dis 5, e1176.
  • Danchin, E.G.J., Arguel, M.-J., Campan-Fournier, A., Perfus-Barbeoch, L., Magliano, M., Rosso, M.-N., Da Rocha, M., Da Silva, C., Nottet, N., Labadie, K., et al. (2013). Identification of Novel Target Genes for Safer and More Specific Control of Root-Knot Nematodes from a Pan-Genome Mining. PLoS Pathog 9, e1003745. DOI: 10.1371/journal.ppat.1003745
  • De Almeida Engler, J., and Gheysen, G. (2013). Nematode-induced endoreduplication in plant host cells: why and how? Mol. Plant Microbe Interact. 26, 17–24.
  • Djian-Caporalino, C., Molinari, S., Palloix, A., Ciancio, A., Fazari, A., Marteu, N., Ris, N., and Castagnone-Sereno, P. The reproductive potential of the root-knot nematode Meloidogyne incognita is affected by selection for virulence against major resistance genes from tomato and pepper. European Journal of Plant Pathology 131, 431–440.
  • Duval, H., Hoerter, M., Polidori, J., Confolent, C., Masse, M., Moretti, A., Van Ghelder, C., and Esmenjaud, D. (2013). High-resolution mapping of the RMia gene for resistance to root-knot nematodes in peach. Tree Genetics & Genomes 1–10.
  • Esmenjaud D. et al.(2013) Characterization and choice of Xiphinema nematodes for breeding a stable resistance to fanleaf disease in grapevine. Innovations Agronomiques 27, 9–22.
  • Flot, J.-F., Hespeels, B., Li, X., Noel, B., Arkhipova, I., Danchin, E.G.J., Hejnol, A., Henrissat, B., Koszul, R., Aury, J.-M., et al. (2013). Genomic evidence for ameiotic evolution in the bdelloid rotifer Adineta vaga. Nature. Doi: 10.1038/nature12326
  • Iberkleid, I., Vieira, P., de Almeida Engler, J., Firester, K., Spiegel, Y., and Horowitz, S.B. (2013). Fatty Acid-and Retinol-Binding Protein, Mj-FAR-1 Induces Tomato Host Susceptibility to Root-Knot Nematodes. PLoS ONE 8, e64586.
  • Jaouannet, M., Magliano, M., Arguel, M.J., Gourgues, M., Evangelisti, E., Abad, P., and Rosso, M.N. (2013). The root-knot nematode calreticulin Mi-CRT is a key effector in plant defense suppression. Mol. Plant Microbe Interact. 26, 97–105.
  • Jones, J.T., Haegeman, A., Danchin, E.G.J., Gaur, H.S., Helder, J., Jones, M.G.K., Kikuchi, T., Manzanilla-López, R., Palomares-Rius, J.E., Wesemael, W.M.L., et al. (2013). Top 10 plant-parasitic nematodes in molecular plant pathology. Molecular Plant Pathology n/a–n/a. doi:10.1111/mpp.12057
  • Khallouk, S., Voisin, R., Portier, U., Polidori, J., Van-Ghelder, C., and Esmenjaud, D. (2013). Multiyear evaluation of the durability of the resistance conferred by Ma and RMia genes to Meloidogyne incognita in Prunus under controlled conditions. Phytopathology. DOI:10.1094/PHYTO-09-12-0228-R
  • Kyndt, T., Vieira, P., Gheysen, G., and Almeida-Engler, J. de (2013). Nematode feeding sites: unique organs in plant roots. Planta 238, 807–818.
  • Laveau, C., Helden, M. van, Darrieutort, G., Esmenjaud, D., and Demangeat, G. (2013). First detection of Tomato black ring virus (TBRV) in a French vineyard. Journal International Des Sciences de La Vigne et Du Vin 47, 191–194.
  • Mallez S., Castagnone C., Espada M., Vieira P., Eisenback J.D., Mota M., Guillemaud T. and Castagnone-Sereno P. (2013). First insights into the genetic diversity of the pinewood nematode in its native area using new polymorphic microsatellite loci.PLoS ONE 8 : e59165.
  • Meštrović, N., Pavlek, M., Car, A., Castagnone-Sereno, P., Abad, P., and Plohl, M. (2013). Conserved DNA Motifs, Including the CENP-B Box-like, Are Possible Promoters of Satellite DNA Array Rearrangements in Nematodes. PLoS ONE 8, e67328.
  • Quentin, M., Abad, P. and Favery, B. (2013). Plant parasitic nematode effectors target host defense and nuclear functions to establish feeding cells.Front. Plant Sci.4, 53
  • Vieira, P., Escudero, C., Rodiuc, N., Boruc, J., Russinova, E., Glab, N., Mota, M., De Veylder, L., Abad, P., Engler, G., et al. (2013). Ectopic expression of Kip-related proteins restrains root-knot nematode-feeding site expansion. New Phytol.
  • Vieira, P., Kyndt, T., Gheysen, G., and de Almeida Engler, J. (2013). An insight into critical endocycle genes for plant-parasitic nematode feeding sites establishment. Plant Signal Behav 8, e24223.

2012

  • Arguel M.J., Jaouannet M., Magliano M., Abad P., Rosso M.N. (2012). siRNAs trigger efficient silencing of a parasitism gene in plant parasitic root-knot nematodes. Genes, 3: 391-408.
  • Arias MC, Danchin EGJ, Coutinho PM, Henrissat B, Ball S. (2012) Eukaryote to gut bacteria transfer of a glycoside hydrolase gene essential for starch breakdown in plants. Mobile Genetic Elements 1;2(2):81-87.
  • Castagnone-Sereno P. (2012). Meloidogyne enterolobii (= M. mayaguensis) : profile of an emerging, highly pathogenic root-knot nematode species. Nematology 14 : 133-138.
  • Coutard, B., Danchin, E.G.J., Oubelaid, R., Canard, B., and Bignon, C. (2012). Single pH buffer refolding screen for protein from inclusion bodies. Protein Expr. Purif. 82, 352–359.
  • Damiani, I., Baldacci-Cresp, F., Hopkins, J., Andrio, E., Balzergue, S., Lecomte, P., Puppo, A., Abad, P., Favery*, B. and Hérouart*, D (co-corresponding authors) (2012). Plant Genes Involved in Harbouring Symbiotic Rhizobia or Pathogenic Nematode. New Phytologist, 194: 511–522.
  • Danchin E.G.J, Rosso MN. (2012) Lateral gene transfers have polished animal genomes: lessons from Nematodes. Frontiers in Cellular and Infectious Microbiology 2:27. doi: 10.3389/fcimb.2012.00027.
  • de Almeida Engler, J., Kyndt, T., Vieira, P., Van Cappelle, E., Bouldolf, V., Sanchez, V., Escobar, C., De Veylder, L., Engler, G., Abad, P., Gheysen, G. (2012)CCS52andDEL1genes are key components of the endocycle in nematode induced feeding sites. The Plant Journal,72: 185-198.
  • Djian-Caporalino C., 2012. Root-knot nematodes (Meloidogyne spp.), a growing problem in French vegetable crops. EPPO Bulletin (Bulletin OEPP- Revue des aspects réglementaires de la protection des végétaux - Organisation Européenne et Méditerranéenne pour la protection des plantes) 42 (1): 127-137.
  • Fabien Baldacci-Cresp, F., Chang, C., Maucourt, M., Deborde, C., Hopkins, J., Lecomte, P., Brouquisse, R., Moing, A., Abad, P., Hérouart, D., Puppo, A., Favery, B. and Frendo, P. (2012). (Homo)glutathione Deficiency Impairs Root-knot NematodeDevelopment inMedicago truncatula.PLoS Pathogens8(1): e1002471.
  • Fazari A., Palloix A., Wang L.H., Hua M.Y., Sage-Palloix A.M., Zhang B.X., Djian-Caporalino C., 2012. The root-knot nematode resistance N-gene co-localizes in the Me-genes cluster on the pepper (Capsicum annuum L.) P9 chromosome. Plant Breeding 131, 665-673 (DOI 10.1111/j.1439-0523.2012.01994.x).
  • Jaouannet M, Perfus-Barbeoch L, Deleury E, Magliano M, Engler G, Vieira P, Danchin EGJ, Da Rocha M, Coquillard P, Abad P, Rosso MN. (2012) A root-knot nematode secreted protein is injected into giant-cells and targeted to the nuclei. New Phytologist 194(4):924-31.
  • Paganini J, Campan-Fournier A, Da Rocha M, Gouret P, Pontarotti P, Wajnberg E, Abad P, Danchin EGJ. (2012) Contribution of Lateral Gene Transfers to the Genome Composition and Parasitic Ability of Root-Knot Nematodes. PLoS One 7(11):e50875
  • Santos, M.F.A. dos, Furlanetto, C., Almeida, M.R.A., Carneiro, M.D.G., Mota, F.C., Gomes, A.C.M.M., Silveira, N.O.R., Silva, J.G.P., Castagnone-Sereno, P., Tigano, M.S., et al. (2012). Biometrical, biological, biochemical and molecular characteristics of Meloidogyne incognita isolates and related species. Eur J Plant Pathol 134, 671–684.
  • Tomalova I., Iachia C., Mulet K. and Castagnone-Sereno P. (2012). The map-1 gene family in root-knot nematodes, Meloidogyne spp. : a set of taxonomically restricted genes specific to clonal species. PLoS One 7 : e38656.
  • Vieira P., Banora M.Y., Castagnone-Sereno P., Rosso M.N., Engler G. and de Almeida-Engler J. (2012). An immunocytochemical procedure for protein localization in nematode pre-parasitic and parasitic stages using methylacrylate-embedded tissues. Phytopathology 102 : 990-996.
  • Vieira, P., Engler, G. & de Almeida Engler, J. (2012). Whole-mount confocal imaging of nuclei in giant feeding-cells induced by root-knot nematodes inArabidopsis. New Phytologist  195: 488-496.
  • Villate, L., Morin, L., Demangeat, G., Van Helden, M., and Esmenjaud, D. 2012. Control of Xiphinema index populations by fallow plants under greenhouse and field conditions. Phytopathology 102: 627-634.

Archives 2011-2006

Liste des publications 2011-2006
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