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Menu Institut Sophia Agrobiotech Inra - 70 ans - Votre avenir est notre culture Univ. Nice Sophia Antipolis CNRS

Institut Sophia Agrobiotech

Institut Sophia Agrobiotech

Institut Sophia Agrobiotech

UMR INRA - Univ. Nice Sophia Antipolis - Cnrs
Inra PACA
400 route des chappes
BP 167
0690 Sophia Antipolis Cedex
FRANCE
Tel. : +33(0)4 92 38 64 00
Fax : + 33(0)4 92 38 64 01

http://www.paca.inra.fr/institut-sophia-agrobiotech

Publications

2018

  • Casagranda, S., Touzeau, S., Ropers, D., and Gouzé, J.-L. (2018). Principal process analysis of biological models. BMC Systems Biology 12, 68. DOI: 10.1186/s12918-018-0586-6
  • Cossu, M., Cossu, A., Deligios, P.A., Ledda, L., Li, Z., Fatnassi, H., Poncet, C., and Yano, A. (2018). Assessment and comparison of the solar radiation distribution inside the main commercial photovoltaic greenhouse types in Europe. Renewable and Sustainable Energy Reviews 94, 822–834. DOI: 10.1016/j.rser.2018.06.001
  • Desnoues, E.; Génard, M.; Quilot-Turion, B. & Baldazzi, V. A kinetic model of sugar metabolism in peach fruit reveals a functional hypothesis of markedly low fructose-to-glucose ratio phenotype. The Plant Journal,2018 DOI: 10.1111/tpj.13890.
  • Hoch, T., Touzeau, S., Viet, A.-F., and Ezanno, P. (2018). Between-group pathogen transmission: From processes to modeling. Ecological Modelling 383, 138–149. DOI: 10.1016/j.ecolmodel.2018.05.016
  • Jabeur, R.B., Fguiri, A., Jeday, M.-R., Chekir, H., Fatnassi, H., and Marvillet, C. (2018). Evaluation of the waste heat discharged from the Di-ammonium Phosphate production plant: a case study. J Mater Cycles Waste Manag 1–10. DOI: 10.1007/s10163-018-0727-4
  • Koch, G., Rolland, G., Dauzat, M., Bédiée, A., Baldazzi, V., Bertin, N., Guédon, Y., and Granier, C. Are compound leaves more complex than simple ones? A multi-scale analysis. Ann Bot. DOI: 10.1093/aob/mcy116
  • Morel Journel, T.; Hautier, M.; Vercken, E. & Mailleret, L. (2018). Clustered or scattered? The impact of habitat quality clustering on establishment and early spread of an introduced population. Ecography. DOI: 10.1111/ecog.03397.
  • Rousseau, E., Tamisier, L., Fabre, F., Simon, V., Szadkowski, M., Bouchez, O., Zanchetta, C., Girardot, G., Mailleret, L., Grognard, F., et al. Impact of genetic drift, selection and accumulation level on virus adaptation to its host plants. Molecular Plant Pathology 0. DOI: 10.1111/mpp.12730
  • Slik, J.W.F., Franklin, J., Arroyo-Rodríguez, V., Field, R., Aguilar, S., Aguirre, N., Ahumada, J., Aiba, S.-I., Alves, L.F., K, A., et al. (2018). Phylogenetic classification of the world’s tropical forests. Proceedings of the National Academy of Sciences of the USA. DOI: 10.1073/pnas.1714977115.

2017

  • Bernard, O., Suay, R., Bechet, Q., Poncet, C., Fatnassi, H., Mairet, F., Sciandra, A., Mangin, A., Coulon, D. and Boubekri, R. (2017). The next generation of microalgae production systems under photovoltaic greenhouses. Acta Hortic. 1170, 921-928. DOI: 10.17660/ActaHortic.2017.1170.118
  • Bertin, N., Fatnassi, H., Vercambre, G. and Poncet, C. (2017). Simulation of tomato production under photovoltaic greenhouses. Acta Hortic. 1170, 425-432. DOI: 10.17660/ActaHortic.2017.1170.52
  • Boulard, T., Roy, J.-C., Pouillard, J.-B., Fatnassi, H., and Grisey, A. (2017). Modelling of micrometeorology, canopy transpiration and photosynthesis in a closed greenhouse using computational fluid dynamics. Biosystems Engineering 158, 110–133. DOI: 10.1016/j.biosystemseng.2017.04.001
  • Calcagno, V., Mitoyen, C., Audiot, P., Ponsard, S., Gao, G.-Z., Lu, Z.-Z., Wang, Z.-Y., He, K.-L., and Bourguet, D. Parallel evolution of behaviour during independent host-shifts following maize introduction into Asia and Europe. Evol Appl. DOI: 10.1111/eva.12481
  • Calcagno, V., Jarne, P., Loreau, M., Mouquet, N., and David, P. (2017). Diversity spurs diversification in ecological communities. Nature Communications 8, ncomms15810. DOI: 10.1038/ncomms15810
  • Desnoues, E., Génard, M., Baldazzi, V., and Quilot-Turion, B. (2017). A kinetic model of sugar metabolism allows the simulation of sugar concentrations and their genetic variability during peach fruit growth. Acta Horticulturae 361–366. DOI: 10.17660/ActaHortic.2017.1160.52
  • Desnoues, E., Génard, M., Quilot-Turion, B., and Baldazzi, V. (2017). A kinetic model of sugar metabolism in peach fruit allows the exploration of genetic variability. Acta Horticulturae 169–176. DOI: 10.17660/ActaHortic.2017.1182.20
  • Majdoubi, H., Fatnassi, H., Boulard, T., Senhaji, A., Demrati, H., Mouqallid, M. and Bouirden, L. (2017). Computational study of thermal performance of an unheated canarian-type greenhouse: influence of the opening configurations on airflow and climate patterns at the crop level. Acta Hortic. 1182, 87-94 DOI: 10.17660/ActaHortic.2017.1182.10
  • Nilusmas, S., Mercat, M., Perrot, T., Touzeau, S., Calcagno, V., Djian Caporalino, C., Castagnone-Sereno, P., and Mailleret, L. (2017). A multi-seasonal model of plant-nematode interactions and its use to identify durable plant resistance deployment strategies. Acta Horticulturae 211–218. DOI: 10.17660/ActaHortic.2017.1182.25
  • Ravigné, V., Lemesle, V., Walter, A., Mailleret, L., and Hamelin, F.M. (2017). Mate Limitation in Fungal Plant Parasites Can Lead to Cyclic Epidemics in Perennial Host Populations. Bull Math Biol 79, 430–447. DOI: 10.1007/s11538-016-0240-7
  • Rousseau, E., Moury, B., Mailleret, L., Senoussi, R., Palloix, A., Simon, V., Valière, S., Grognard, F., and Fabre, F. (2017). Estimating virus effective population size and selection without neutral markers. PLOS Pathogens 13, e1006702.  DOI: 10.1371/journal.ppat.1006702
  • Roy, J.C., Fatnassi, H., Boulard, T., Pouillard, J.B. and Grisey, A. (2017). CFD determination of the climate distribution in a semi closed greenhouse with air cooling. Acta Hortic. 1170, 103-110DOI: 10.17660/ActaHortic.2017.1170.11
  • Suay, R., Poncet, C., and Fatnassi, H. (2017). Is it time for photovoltaic greenhouses? Acta Horticulturae 915–920. DOI: 10.17660/ActaHortic.2017.1170.117
  • Tamisier, L., Rousseau, E., Barraillé, S., Nemouchi, G., Szadkowski, M., Mailleret, L., Grognard, F., Fabre, F., Moury, B., and Palloix, A. (2017). Quantitative trait loci in pepper control the effective population size of two RNA viruses at inoculation. Journal of General Virology. DOI: 10.1099/jgv.0.000835
  • Teixeira Alves, M., Grognard, F., Calcagno, V., and Mailleret, L. (2016). Shared predation: positive effects of predator distraction. bioRxiv. DOI: 10.1101/063230
  • Urlić, B., Špika, M.J., Becker, C., Kläring, H.-P., Krumbein, A., Ban, S.G., and Schwarz, D. (2017). Effect of NO3 and NH4 concentrations in nutrient solution on yield and nitrate concentration in seasonally grown leaf lettuce. Acta Agriculturae Scandinavica, Section B - Soil & Plant Science 67, 748–757. DOI: 10.1080/09064710.2017.1347704
  • van Oudenhove, L., Mailleret, L., and Fauvergue, X. (2017). Infochemical use and dietary specialization in parasitoids: a meta-analysis. Ecol Evol. DOI: 10.1002/ece3.2888

2016

  • Bajeux, N., Grognard, F., and Mailleret, L. (2016). Augmentative biocontrol when natural enemies are subject to Allee effects. J. Math. Biol. 1–27.
  • Barbosa da Silva, F.H., Arieira, J., Parolin, P., Nunes da Cunha, C., and Junk, W.J. (2016). Shrub encroachment influences herbaceous communities in flooded grasslands of a neotropical savanna wetland. Appl Veg Sci 19, 391–400. DOI: 10.1111/avsc.12230
  • Errard, A., Ulrichs, C., Kühne, S., Mewis, I., Mishig, N., Maul, R., Drungowski, M., Parolin, P., Schreiner, M., and Baldermann, S. (2016). Metabolite Profiling Reveals a Specific Response in Tomato to Predaceous Chrysoperla carnea Larvae and Herbivore(s)-Predator Interactions with the Generalist Pests Tetranychus urticae and Myzus persicae. Front Plant Sci 7, 1256.
  • Ferreira, L.V., Parolin, P., Matos, D.C.L., Cunha, D.A., Chaves, P.P., Neckel, S.O. (2016). The effect of exotic grass Urochloa decumbens (Stapf) R.D.Webster(Poaceae) in the reduction of species richness and change of floristic composition of natural regeneration in the Floresta Nacional de Carajás, Brazil. Anais Da Academia Brasileira de Ciências. DOI: 10.1590/0001-3765201620150121
  • Gauthier, G., Péron, G., Lebreton, J.-D., Grenier, P., and Oudenhove, L. van (2016). Partitioning prediction uncertainty in climate-dependent population models. Proc. R. Soc. B 283, 20162353.
  • Hamelin, F.M., Bisson, A., Desprez-Loustau, M.-L., Fabre, F., and Mailleret, L. (2016). Temporal niche differentiation of parasites sharing the same plant host: oak powdery mildew as a case study. Ecosphere 7. DOI: 10.1002/ecs2.1517
  • Hirich, A., Fatnassi, H., Ragab, R., and Choukr-Allah, R. (2016). Prediction of Climate Change Impact on Corn Grown in the South of Morocco Using the Saltmed Model. Irrig. and Drain. 65, 9–18. DOI: 10.1002/ird.2002
  • Morel-Journel, T., Piponiot, C., Vercken, E., and Mailleret, L. (2016). Evidence for an optimal level of connectivity for establishment and colonization. Biology Letters 12, 20160704. DOI: 10.1098/rsbl.2016.0704
  • Morel-Journel, T., Girod, P., Mailleret, L., Auguste, A., Blin, A., and Vercken, E. (2016). The highs and lows of dispersal: how connectivity and initial population size jointly shape establishment dynamics in discrete landscapes. Oikos. DOI: 10.1111/oik.02718
  • Pérez-Hedo, M., Suay, R., Alonso, M., Ruocco, M., Giorgini, M., Poncet, C., and Urbaneja, A.(2016) Resilience and robustness of IPM in protected horticulture in the face of potential invasive pests. Crop Protection.
  • Savall, J.F., Bidot, C., Leblanc-Maridor, M., Belloc, C., and Touzeau, S. Modelling Salmonella transmission among pigs from farm to slaughterhouse: Interplay between management variability and epidemiological uncertainty. International Journal of Food Microbiology. DOI: 10.1016/j.ijfoodmicro.2016.03.020

2015

  • Fabre, F., Rousseau, E., Mailleret, L., and Moury, B. (2015). Epidemiological and evolutionary management of plant resistance: optimizing the deployment of cultivar mixtures in time and space in agricultural landscapes. Evol Appl. DOI: 10.1111/eva.12304
  • Facon, B., Mailleret, L., Renault, D., and Roques, L. (2015). Biological invasion processes: evaluation and prediction. Revue d'Ecologie 70, 110-113. http://hdl.handle.net/2042/57889
  • Fatnassi, H., Poncet, C., Bazzano, M.M., Brun, R., and Bertin, N. (2015). A numerical simulation of the photovoltaic greenhouse microclimate. Solar Energy 120, 575–584. DOI: 10.1016/j.solener.2015.07.019
  • Fatnassi, H., Pizzol, J., Senoussi, R., Biondi, A., Desneux, N., Poncet, C., and Boulard, T. (2015). Within-Crop Air Temperature and Humidity Outcomes on Spatio-Temporal Distribution of the Key Rose Pest Frankliniella occidentalis. PLoS ONE 10, e0126655. DOI: 10.1371/journal.pone.0126655
  • Ghosh, B., Grognard, F., and Mailleret, L. (2015). Natural enemies deployment in patchy environments for augmentative biological control. Applied Mathematics and Computation 266, 982–999. DOI: 10.1016/j.amc.2015.06.021
  • Henriques-Silva, R., Boivin, F., Calcagno, V., Urban, M.C., and Peres-Neto, P.R. (2015). On the evolution of dispersal via heterogeneity in spatial connectivity. Proceedings of the Royal Society of London B: Biological Sciences 282, 20142879. DOI: 10.1098/rspb.2014.2879
  • Hubert, N., Calcagno, V., Etienne, R.S., and Mouquet, N. (2015). Metacommunity speciation models and their implications for diversification theory. Ecol Lett. DOI: 10.1111/ele.12458
  • Morel-Journel, T., Girod, P., Mailleret, L., Auguste, A., Blin, A., and Vercken, E. (2015). The highs and lows of dispersal: how connectivity and initial population size jointly shape establishment dynamics in discrete landscapes. Oikos. DOI: 10.1111/oik.02718
  • Morel-Journel, Thibaut; Fauvergue, Xavier; Lombaert, Eric; Mailleret, Ludovic; Malausa, Thibaut; Ris, Nicolas; Vercken, Elodie (2015). De l’utilisation de microcosmes pour le test d’hypothèses en biologie de l’invasion. Revue d'Ecologie 70, 16–27. http://hdl.handle.net/2042/57879
  • Parolin, P., Bresch, C., Poncet, C., Suay-Cortez, R., and Oudenhove, L.V. (2015). Testing basil as banker plant in IPM greenhouse tomato crops. International Journal of Pest Management 61, 235–242. DOI: 10.1080/09670874.2015.1042414
  • Parolin Pia, Bresch Cécile , and Poncet Christine (2015). Biocontrol plants and functional diversity in biological control of the red spider mite Tetranychus urticae : A review. International Journal of Agricultural Policy and Research 3, 198–212. DOI: dx.doi.org/10.15739/IJAPR.041i
  • Parolin, P., Bresch, C., Oudenhove, L. van, Errard, A., and Poncet, C. (2015). Distribution of pest and predatory mites on plants with differing availability of acarodomatia. International Journal of Agricultural Policy and Research 3, 267–278.
  • Vercken, E., Fauvergue, X., Ris, N., Crochard, D., and Mailleret, L. (2015). Temporal autocorrelation in host density increases establishment success of parasitoids in an experimental system. Ecol Evol. DOI: 10.1002/ece3.1505

2014

  • Bout A., S. Blanquart, P. Parolin & C. Poncet (2014). Multi-criteria decision aid as a new tool to apprehend factors affecting adoption of sustainable practices in ornamental greenhouses. International Journal of Agricultural Policy and Research 2, 1-9.
  • Bresch Cécile,Ottenwalder Lydia , Poncet Christine, and Parolin Pia (2014). Tobacco as Banker Plant for Macrolophus Pygmaeus to Control Trialeurodes Vaporariorum in Tomato Crops. Universal Journal of Agricultural Research 2, 297–304.
  •  DOI: 10.13189/ujar.2014.020803
  • Calcagno V., L. Mailleret, E. Wajnberg & F. Grognard (2014). How optimal foragers should respond to habitat changes: a reanalysis of the Marginal Value Theorem. Journal of Mathematical Biology, 69, 1237-1265. DOI: 10.1007/s00285-013-0734-y
  • Calcagno, V., Grognard, F., Hamelin, F.M., Wajnberg, É., and Mailleret, L. (2014). The functional response predicts the effect of resource distribution on the optimal movement rate of consumers. Ecology Letters. DOI: 10.1111/ele.12379
  • Castel M., L. Mailleret, D. Andrivon, V. Ravigné & F.M. Hamelin (2014). Allee effects and the evolution of polymorphism in cyclic parthenogens. The American Naturalist, 183, E75-E88.
  • Cerdá, X. ; Van Oudenhove de Saint Géry, L. ; Bernstein, C. ; Boulay, R. A list of and some comments about the trail pheromones of ants. Natural Product Communications. , 2014, 9 (8) : 1115-1122.
  • Chailleux A., E.K. Mohl, M. Teixeira Alves, G.J. Messelink & N. Desneux (2014). Natural enemy-mediated indirect interactions among prey species: potential for enhancing biocontrol services in agroecosystems. Pest Management Science, 70, 1769–1779.
  • Clematis, F., Viglione, S., Beruto, M., Lanzotti, V., Dolci, P., Poncet, C., and Curir, P. (2014). Endogenous isoflavone methylation correlates with the in vitro rooting phases of Spartium junceum L. (Leguminosae). Journal of Plant Physiology. DOI: 10.1016/j.jplph.2014.03.013
  • El-Arnaouty, S. a., Pizzol, J., Galal, H. h., Kortam, M. n., Afifi, A. i., Beyssat, V., Desneux, N., Biondi, A., and Heikal, I. h. (2014). Assessment of Two Trichogramma Species for the Control of Tuta absoluta in North African Tomato Greenhouses. African Entomology 22, 801–809. DOI: 10.4001/003.022.0410
  • Go, N., Bidot, C., Belloc, C., and Touzeau, S. (2014). Integrative Model of the Immune Response to a Pulmonary Macrophage Infection: What Determines the Infection Duration? PLoS ONE 9, e107818. DOI: 10.1371/journal.pone.0107818
  • Lebon, A., Mailleret, L., Dumont, Y., and Grognard, F. Direct and apparent compensation in plant–herbivore interactions. Ecological Modelling. DOI: 10.1016/j.ecolmodel.2014.02.020
  • Oliveira, M.T. de, Damasceno-Junior, G.A., Pott, A., Paranhos Filho, A.C., Suarez, Y.R., and Parolin, P. (2014). Regeneration of riparian forests of the Brazilian Pantanal under flood and fire influence. Forest Ecology and Management 331, 256–263. DOI: 10.1016/j.foreco.2014.08.011
  • Papaïx, J., Adamczyk-Chauvat, K., Bouvier, A., Kiêu, K., Touzeau, S., Lannou, C., and Monod, H. (2014). Pathogen population dynamics in agricultural landscapes: The Ddal modelling framework. Infect. Genet. Evol. DOI: 10.1016/j.meegid.2014.01.022.
  • Parolin P., Bresch C., Ruiz G. & Poncet C. (2014). Multiple choice for mites: First food, then home. International Journal of Agricultural Policy and Research 2, 49–54.
  • Parolin P., C. Bresch, C. Poncet & N. Desneux (2014). Introducing the term 'Biocontrol Plants' for Integrated Pest Management. Scientia Agricola 71, 77-80.
  • Pizzol J.,Nammour D., Rabasse J.M., .Parolin P., Desneux N., Poncet C., Reynaud P. (2014). Species and population dynamics of thrips occurring inside and outside greenhouses cultivated with roses in southern France. International Journal of Agricultural Policy and Research 2, 141–153.
  • Van Oudenhove, L., Gauthier, G., and Lebreton, J.-D. (2014). Year-round effects of climate on demographic parameters of an arctic-nesting goose species. J Anim Ecol.  DOI:10.1111/1365-2656.12230.
  • Walker, A.-S., Gladieux, P., Decognet, V., Fermaud, M., Confais, J., Roudet, J., Bardin, M., Bout, A., Nicot, P., Poncet, C., et al. (2014). Population structure and temporal maintenance of the multihost fungal pathogen Botrytis cinerea: causes and implications for disease management. Environ Microbiol. Doi: 10.1111/1462-2920.12563.

2013

  • Fatnassi, H., Boulard, T., and Bouirden, L. (2013). Development, validation and use of a dynamic model for simulate the climate conditions in a large scale greenhouse equipped with insect-proof nets. Computers and Electronics in Agriculture 98, 54–61.
  • Mouquet, N., Gravel, D., Massol, F., and Calcagno, V. (2013). Extending the concept of keystone species to communities and ecosystems. Ecology Letters 16, 1–8.
  • Vercken E, Vincent F, Mailleret L, Ris N, Tabone E, Fauvergue X. 2013. Time-lag in extinction dynamics in experimental populations: evidence for a genetic Allee effect? Journal of Animal Ecology. doi:10.1111/1365-2656.12051
  • Zappalà, L., Biondi, A., Alma, A., Al-Jboory, I.J., Arnò, J., Bayram, A., Chailleux, A., El-Arnaouty, A., Gerling, D., Guenaoui, Y., et al. Natural enemies of the South American moth, Tuta absoluta, in Europe, North Africa and Middle East, and their potential use in pest control strategies. J Pest Sci 1–13. DOI:10.1007/s10340-013-0531-9
  • Zhou, L.-J., Zhu, Z.-H., Liu, Z.-X., Ma, W.-H., Desneux, N., and Lei, C.-L. (2013). Identification and Transcriptional Profiling of Differentially Expressed Genes Associated With Response to UVA Radiation in Drosophila melanogaster (Diptera: Drosophilidae). Environmental Entomology 42, 1110–1117.

2012

  • Calcagno V., E. Demoinet, K. Gollner, L. Guidi, D. Ruths & C. de Mazancourt. (2012). Flows of research manuscripts among scientific journals reveal hidden submission patterns. Science338, 1065-1069.
  • Fabre, F., Rousseau, E., Mailleret, L., and Moury, B. (2012). Durable strategies to deploy plant resistance in agricultural landscapes. New Phytol. 193, 1064–1075.
  • Katsoulas N., T. Boulard, N. Tsiropoulos, T. Bartzanas & C. Kittas (2012). Experimental and modelling analysis of pesticide fate from greenhouses: The case of pyrimethanil on a tomato crop. Biosystems Engineering, 113, 195-206.
  • Kichah A., P.E. Bournet, C. Migeon & T. Boulard (2012). Measurements and CFD simulations of microclimate characteristics and transpiration of an Impatiens pot plant crop in a greenhouse. Biosystems Engineering, 112, 22-34.
  • Mailleret L., M. Castel, J. Montarry & F.M. Hamelin (2012). From elaborate to compact seasonal plant epidemic models and back: is competitive exclusion in the details? Theoretical Ecology, 5, 311-324.
  • Nebbali R., J.C. Roy & T. Boulard (2012). Dynamic simulation of the distributed radiative and convective climate within a cropped greenhouse. Renewable Energy, 43, 111-129.
  • Parolin P., C. Bresch, N. Desneux, R. Brun, A. Bout, B. Boll & C. Poncet (2012). Secondary plants used in biological control: A review. International Journal of Pest Management, 58, 91-100.
  • Parolin P., C. Bresch, C. Poncet & N. Desneux (2012). Functional characteristics of secondary plants for increased pest management. International Journal of Pest Management, 58, 369-377.
  • Pizzol J., N. Desneux, E. Wajnberg & D. Thiéry (2012). Parasitoid and host egg ages have independent impact on various biological traits in a Trichogramma species. Journal of Pest Science, 85, 489-496.
  • Renoult L., X. Wang, V. Calcagno, M. Prévost & J.B. Debruille (2012). From N400 to N300: Variations in the timing of semantic processing with repetition. NeuroImage, 61, 206-215.

Archives 2011-2006

Liste des publications 2011-2006
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